adelie.matrix.snp_unphased#

adelie.matrix.snp_unphased(io: ~adelie.io.snp_unphased, *, n_threads: int = 1, dtype: ~numpy.float32 | ~numpy.float64 = <class 'numpy.float64'>)[source]#

Creates a SNP unphased matrix.

The SNP unphased matrix is a wrapper around the corresponding IO handler adelie.io.snp_unphased exposing some matrix operations.

Note

This matrix only works for naive method!

Parameters:

iosnp_unphased: IO handler for SNP unphased data.
n_threadsint, optional: Number of threads. Default is 1.
dtypeUnion[float32, float64], optional: Underlying value type. Default is np.float64.

Returns:

wrap: Wrapper matrix object.

See also

adelie.io.snp_unphased
adelie.adelie_core.matrix.MatrixNaiveSNPUnphased32
adelie.adelie_core.matrix.MatrixNaiveSNPUnphased64